Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 148527

Identification

Species:
Sorghum bicolor
Gene model
148527
Description
estExt_fgenesh1_kg.C_chr_40076
Family
AP2-EREBP
3D structure (top 5)
1GCC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

474196 Score: 1

Arabidopsis thaliana

AT1G50640.1 Score: 1

Carica papaya

evm.TU.supercontig_12.254 Score: 1
evm.TU.supercontig_132.35 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g09650.1 Score: 1

Populus trichocarpa

707534 Score: 1

Vitis vinifera

GSVIVP00025959001 Score: 1

Zea mays

GRMZM2G079653_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.80845
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126M08, full insert sequence /gb=CT829864
Vvi.7125
WIN0554.C21_M09 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0554_M09 3', mRNA sequence /clone=WIN0554_M09 /clone_end=3' /gb=EC952142

Domain Architecture

AP2 PF00847 148527
DomainStartEndBit scoreE-value
AP2197080.65.8e-21

Sequences

protein sequence
transcript sequence