Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 149272

Identification

Species:
Sorghum bicolor
Gene model
149272
Description
estExt_fgenesh1_kg.C_chr_70056
Family
bHLH
3D structure (top 5)
1AM9 1HLO 1NKP 1NLW 2QL2
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

495811 Score: 1

Arabidopsis thaliana

AT5G57150.1 Score: 1

Carica papaya

evm.TU.supercontig_115.69 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g23550.1 Score: 1

Populus trichocarpa

652858 Score: 1

Vitis vinifera

GSVIVP00006790001 Score: 1

Zea mays

GRMZM2G042895_P01 Score: 1
GRMZM2G163831_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.8427
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf38g03, mRNA sequence /gb=AK249671
Os.6043
Oryza sativa RERJ1 mRNA for Transcription Factor, complete cds /cds=p(66,998) /gb=AB040744
Sbi.8646
WOUND1_41_F08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_41_F08_A002 3', mRNA sequence /clone=WOUND1_41_F08_A002 /clone_end=3' /gb=CN146448 /gi=45986384

Domain Architecture

HLH PF00010 149272
DomainStartEndBit scoreE-value
HLH8113045.42.3e-10

Sequences