Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 150953

Identification

Species:
Physcomitrella patens
Gene model
150953
Description
e_gw1.325.18.1
Family
HB
3D structure (top 5)
1B8I 2DA3 2CRA 1NK2 2E1O
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Physcomitrella patens

150953 Score: 1
6570 Score: 1

Arabidopsis thaliana

AT1G69780.1 Score: 1
AT5G15150.1 Score: 1

Expression data

Expressed Sequence Tags

Ppa.10674
BY991514 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS139G11 5', mRNA sequence /clone=PPLS139G11 /clone_end=5' /gb=BY991514
Ppa.11132
Physcomitrella patens mRNA for homeobox protein PpHB9, complete cds /cds=p(1,657) /gb=AB028080
Ppa.11823
Physcomitrella patens mRNA for homeobox protein PpHB6, complete cds /cds=p(240,1277) /gb=AB028077
Ppa.14003
Physcomitrella patens mRNA for homeobox protein PpHB5, complete cds /cds=p(375,1298) /gb=AB028076
Ppa.161
Physcomitrella patens mRNA for homeobox protein PpHB2, partial cds /cds=p(1,821) /gb=AB028073
Ppa.162
Physcomitrella patens mRNA for homeobox protein PpHB1, partial cds /cds=p(1,793) /gb=AB028072
Ppa.25898
DC936717 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. patens cDNA clone ppgs23c15 5', mRNA sequence /clone=ppgs23c15 /clone_end=5' /gb=DC936717
Ppa.8098
BY991229 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS138K14 5', mRNA sequence /clone=PPLS138K14 /clone_end=5' /gb=BY991229
Ppa.9753
BJ968285 ppsp full-length cDNA libary Physcomitrella patens subsp. patens cDNA clone ppsp46c11 5', mRNA sequence /clone=ppsp46c11 /clone_end=5' /gb=BJ968285

Domain Architecture

Homeobox PF00046 150953
DomainStartEndBit scoreE-value
Homeobox9414869.79.5e-18
HALZ149193308.7e-06

Sequences