version: 3.0
Gene model: 154856
Identification
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Genome Databases
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Chlorella sp. NC64A
139911 Score: 1Carica papaya
evm.TU.supercontig_96.28 Score: 1Chlamydomonas reinhardtii
142903 Score: 1Coccomyxa sp. C-169
77471 Score: 1Physcomitrella patens
154856 Score: 1200454 Score: 1
Oryza sativa subsp. japonica
LOC_Os02g58210.1 Score: 1LOC_Os03g31594.1 Score: 1
LOC_Os03g31594.2 Score: 1
LOC_Os02g58210.2 Score: 0.994
Populus trichocarpa
207883 Score: 1Sorghum bicolor
4885362 Score: 1Vitis vinifera
GSVIVP00008625001 Score: 1Expression data
- NCBI EST Profile Viewer (UniGene: At.3531)
- NCBI EST Profile Viewer (UniGene: Hv.4909)
- NCBI EST Profile Viewer (UniGene: Mtr.22381)
- NCBI EST Profile Viewer (UniGene: Os.18195)
- NCBI EST Profile Viewer (UniGene: Os.50915)
- NCBI EST Profile Viewer (UniGene: Os.6505)
- NCBI EST Profile Viewer (UniGene: Os.79778)
- NCBI EST Profile Viewer (UniGene: Ppa.19248)
- NCBI EST Profile Viewer (UniGene: Ppa.20723)
- NCBI EST Profile Viewer (UniGene: Ppa.6739)
- NCBI EST Profile Viewer (UniGene: Vvi.11982)
- NCBI EST Profile Viewer (UniGene: Vvi.4830)
Expressed Sequence Tags
- At.3531
- Arabidopsis thaliana transcription factor jumonji (jmjC) domain-containing protein (AT4G00990) mRNA, complete cds /cds=p(92,2614) /gb=NM_116327
- Hv.4909
- BJ484812 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah56d17 3', mRNA sequence /clone=bah56d17 /clone_end=3' /gb=BJ484812
- Mtr.22381
- METAL93TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY475949
- Os.18195
- Oryza sativa Japonica Group cDNA clone:J033020J08, full insert sequence /gb=AK073195
- Os.50915
- Oryza sativa Japonica Group cDNA clone:001-028-A06, full insert sequence /cds=p(115,1254) /gb=AK059445
- Os.6505
- Oryza sativa Japonica Group cDNA clone:001-023-A12, full insert sequence /gb=AK059145
- Os.79778
- Oryza sativa (japonica cultivar-group) Os02g0109400 (Os02g0109400) mRNA, complete cds /cds=p(1,2994) /gb=NM_001052179
- Ppa.19248
- Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_118936) mRNA, partial cds /cds=p(1,1998) /gb=XM_001757080
- Ppa.20723
- Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_154856) mRNA, complete cds /cds=p(1,2082) /gb=XM_001785065
- Ppa.6739
- Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_200454) mRNA, complete cds /cds=p(181,2250) /gb=XM_001784865
- Vvi.11982
- CAP0006_IVR_F05 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0006_IVR_F05 3', mRNA sequence /clone=CAP0006_IVR_F05 /clone_end=3' /gb=CF519154
- Vvi.4830
- CAB2SG0004_IaR_D10 Cabernet Sauvignon Berry - CAB2SG Vitis vinifera cDNA clone CAB2SG0004_IaR_D10 3', mRNA sequence /clone=CAB2SG0004_IaR_D10 /clone_end=3' /gb=CB348379