Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 160930

Identification

Species:
Physcomitrella patens
Gene model
160930
Description
estExt_fgenesh1_pg.C_280046
Family
Sigma70-like
3D structure (top 5)
1RP3 1SIG 1L0O 2A6H 1L9Z
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Chlamydomonas reinhardtii

206388 Score: 1

Expression data

Expressed Sequence Tags

Ppa.1
Physcomitrella patens Sig2 mRNA for PpSIG2, complete cds /cds=p(236,1975) /gb=AB046872
Ppa.18172
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_160930) mRNA, complete cds /cds=p(243,2018) /gb=XM_001757423
Ppa.24245
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_178031) mRNA, complete cds /cds=p(1,1752) /gb=XM_001757532

Domain Architecture

Sigma70_r1_2 PF00140 160930
DomainStartEndBit scoreE-value
Sigma70_r1_227330954.34.3e-13
Sigma70_r235442495.41.8e-25
Sigma70_r3428510112.51.2e-30
Sigma70_r452257594.24.1e-25

Sequences