Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 161158

Identification

Species:
Physcomitrella patens
Gene model
161158
Description
estExt_fgenesh1_pg.C_300102
Family
C3H
3D structure (top 5)
2D9N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.29470
RUS113B09r HY Hordeum vulgare subsp. vulgare cDNA clone HY02I16, mRNA sequence /clone=HY02I16 /gb=FD524654
Mtr.21570
MEUAY59TR JCVI-MT2 Medicago truncatula cDNA 3', mRNA sequence /clone_end=3' /gb=GE351191
Pba.6362
WS02543.B21_N01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_N01 3', mRNA sequence /clone=WS02543_N01 /clone_end=3' /gb=DT490017
Ppa.20585
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_161158) mRNA, complete cds /cds=p(1,6165) /gb=XM_001757970
Pth.6362
WS02543.B21_N01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_N01 3', mRNA sequence /clone=WS02543_N01 /clone_end=3' /gb=DT490017

Domain Architecture

zf-CCCH PF00642 161158
DomainStartEndBit scoreE-value
zf-CCCH1810183720.50.0027
zf-CCCH1838186280.12
zf-CCCH1865188910.90.05
zf-CCCH1892191714.20.018

Sequences