Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 164635

Identification

Species:
Selaginella moellendorffii
Gene model
164635
Description
estExt_Genewise1Plus.C_10154
Family
PHD
3D structure (top 5)
3H6L 2W5Y 2F69 1ML9 3BO5
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

907732 Score: 1

Arabidopsis thaliana

AT3G61740.2 Score: 1
AT3G61740.1 Score: 0.987

Carica papaya

evm.TU.supercontig_3.76 Score: 1

Micromonas sp. RCC299

57801 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g11952.1 Score: 1

Physcomitrella patens

145070 Score: 1

Populus trichocarpa

421736 Score: 1

Sorghum bicolor

5001210 Score: 1

Vitis vinifera

GSVIVP00027049001 Score: 1

Zea mays

GRMZM2G085266_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.28779
HDP28P14T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP28P14, mRNA sequence /clone=HDP28P14 /gb=EX593775
Pba.1904
WS0232.B21_L14 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_L14 3', mRNA sequence /clone=WS0232_L14 /clone_end=3' /gb=CV239535
Ppa.18391
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_145070) mRNA, complete cds /cds=p(1,2724) /gb=XM_001777540
Pth.12969
F033P65.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F033P65 3', mRNA sequence /clone=F033P65 /clone_end=3' /gb=CK090938
Pth.13471
WS0162.B21_F01 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_F01 3', mRNA sequence /clone=WS0162_F01 /clone_end=3' /gb=CV225758
Vvi.19260
VVI069F03_593334 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI069F03 5, mRNA sequence /clone=VVI069F03 /clone_end=5' /gb=DT021747
Vvi.21312
WIN1115.C21_N03 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1115_N03 3', mRNA sequence /clone=WIN1115_N03 /clone_end=3' /gb=EC982390

Domain Architecture

PHD PF00628 164635
DomainStartEndBit scoreE-value
PHD12517929.31.6e-05
SET6047331652.3e-46

Sequences