Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 170895

Identification

Species:
Physcomitrella patens
Gene model
170895
Description
estExt_fgenesh1_pg.C_2670037
Family
HB
3D structure (top 5)
2DA3 2ECC 2DA2 1B72 2DMQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

913493 Score: 1

Arabidopsis thaliana

AT4G29940.1 Score: 1

Micromonas pusilla CCMP1545

59356 Score: 1

Micromonas sp. RCC299

63537 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g12400.1 Score: 1

Populus trichocarpa

560666 Score: 1

Sorghum bicolor

4895471 Score: 1

Selaginella moellendorffii

438630 Score: 1

Vitis vinifera

GSVIVP00009253001 Score: 1

Zea mays

GRMZM2G094935_P01 Score: 1

Expression data

Expressed Sequence Tags

At.19983
Arabidopsis thaliana homeodomain protein (PRHA) mRNA, complete cds /cds=p(215,2605) /gb=L21991
Hv.6078
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf120a17, mRNA sequence /gb=AK251701
Ppa.17245
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170895) mRNA, complete cds /cds=p(1,2379) /gb=XM_001779822

Domain Architecture

PHD PF00628 170895
DomainStartEndBit scoreE-value
PHD18724268.52.2e-17
Homeobox61366915.90.0003

Sequences