Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 172536

Identification

Species:
Physcomitrella patens
Gene model
172536
Description
estExt_fgenesh1_pg.C_3580029
Family
BSD
3D structure (top 5)
1X3A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

497083 Score: 1

Arabidopsis thaliana

AT4G13110.1 Score: 1

Carica papaya

evm.TU.supercontig_16.58 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g16670.1 Score: 1

Populus trichocarpa

418595 Score: 1

Sorghum bicolor

5001753 Score: 1

Selaginella moellendorffii

416268 Score: 1

Zea mays

GRMZM2G013378_P01 Score: 1

Expression data

Expressed Sequence Tags

Ppa.10604
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_172536) mRNA, complete cds /cds=p(463,1830) /gb=XM_001783248
Ppa.8284
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_94244) mRNA, complete cds /cds=p(1,1074) /gb=XM_001779330

Domain Architecture

BSD PF03909 172536
DomainStartEndBit scoreE-value
BSD21528067.25.5e-17

Sequences

protein sequence
transcript sequence