Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 172711

Identification

Species:
Chlamydomonas reinhardtii
Gene model
172711
Description
fgenesh2_pg.C_scaffold_19000110
Family
SET
3D structure (top 5)
2R3A 2RFI 1H3I 2W5Y 3H6L
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

311665 Score: 1

Arabidopsis thaliana

AT1G05830.1 Score: 1
AT1G05830.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g04890.1 Score: 1

Physcomitrella patens

197069 Score: 1

Populus trichocarpa

246366 Score: 1
755956 Score: 1

Sorghum bicolor

4789006 Score: 1

Selaginella moellendorffii

445108 Score: 1

Vitis vinifera

GSVIVP00005671001 Score: 1

Zea mays

GRMZM2G013794_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.7059
Oryza sativa Japonica Group cDNA clone:J033074A15, full insert sequence /cds=p(186,3254) /gb=AK074022
Ppa.20534
Physcomitrella patens subsp. patens trithorax-like protein, histone-lysine N-methyltransferase (SDG1512) mRNA, complete cds /cds=p(1,2709) /gb=XM_001780535

Domain Architecture

PWWP PF00855 172711
DomainStartEndBit scoreE-value
PWWP6297004.30.0069
FYRN80786022.80.00036
FYRC86394227.84.3e-05
SET15141650120.26.8e-33

Sequences