Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 173099

Identification

Species:
Physcomitrella patens
Gene model
173099
Description
estExt_fgenesh1_pg.C_4100005
Family
C2C2-GATA
3D structure (top 5)
4GAT 1GNF 2KAE 2VUT
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Populus trichocarpa

264796 Score: 1

Sorghum bicolor

4996948 Score: 1

Zea mays

GRMZM2G120108_P01 Score: 1

Expression data

Expressed Sequence Tags

Ppa.18937
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_159137) mRNA, partial cds /cds=p(149,814) /gb=XM_001753403
Ppa.20681
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_166697) mRNA, complete cds /cds=p(12,1766) /gb=XM_001770101
Ppa.21005
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_173099) mRNA, complete cds /cds=p(9,1796) /gb=XM_001784500

Domain Architecture

GATA PF00320 173099
DomainStartEndBit scoreE-value
GATA74254.83e-13

Sequences