Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 17453

Identification

Species:
Chlamydomonas reinhardtii
Gene model
17453
Description
fgenesh1_pg.C_scaffold_31000185
Family
TUB
3D structure (top 5)
3C5N 2FIM
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

480735 Score: 1

Arabidopsis thaliana

AT2G18280.1 Score: 1
AT2G18280.2 Score: 1

Chlorella sp. NC64A

28000 Score: 1

Carica papaya

evm.TU.supercontig_9.163 Score: 1

Coccomyxa sp. C-169

25937 Score: 1

Micromonas pusilla CCMP1545

35442 Score: 1

Micromonas sp. RCC299

63330 Score: 1

Ostreococcus lucimarinus

44336 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g47110.1 Score: 1

Physcomitrella patens

221902 Score: 1
221905 Score: 0.976

Populus trichocarpa

551319 Score: 1
801331 Score: 1
820895 Score: 1

Sorghum bicolor

123770 Score: 1

Selaginella moellendorffii

83983 Score: 1

Vitis vinifera

GSVIVP00019826001 Score: 1

Zea mays

GRMZM2G129288_P01 Score: 1
GRMZM2G129288_P02 Score: 1
GRMZM2G129288_P03 Score: 1

Expression data

Expressed Sequence Tags

Cre.3151
Chlamydomonas reinhardtii strain CC-503 cw92 mt+ /cds=p(130,1485) /gb=XM_001697006
Vca.6851
CBHO17507.rev CBHO Volvox carteri f. nagariensis female Eve10 (asexuall, 2-4 cell stage, 32-128 cell stage, inversion) Volvox carteri f. nagariensis cDNA clone CBHO17507 3', mRNA sequence /clone=CBHO17507 /clone_end=3' /gb=FD873900

Domain Architecture

Tub PF01167 17453
DomainStartEndBit scoreE-value
Tub211445372.57.4e-109

Sequences