Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 177985

Identification

Species:
Selaginella moellendorffii
Gene model
177985
Description
estExt_Genewise1Plus.C_430073
Family
PHD
3D structure (top 5)
1WP9 3DMQ 1Z3I 2FWR 1Z5Z
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Micromonas sp. RCC299

64845 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g08480.1 Score: 1

Expression data

Expressed Sequence Tags

At.11745
Arabidopsis thaliana PKL (PICKLE) (PKL) mRNA, complete cds /cds=p(25,4179) /gb=NM_128074
Os.10905
Oryza sativa (japonica cultivar-group) Os07g0497000 (Os07g0497000) mRNA, partial cds /cds=p(1,1869) /gb=NM_001066240
Ppa.22788
Physcomitrella patens subsp. patens SNF2 family DNA-dependent ATPase (CHR1512) mRNA, partial cds /cds=p(1,3663) /gb=XM_001758649

Domain Architecture

PHD PF00628 177985
DomainStartEndBit scoreE-value
PHD509557.64.7e-14
Chromo18523568.91.9e-17
SNF2_N2725653681.7e-107
Helicase_C62270193.57.1e-25
DUF108782488649.99.7e-12
DUF10869061045148.61.9e-41

Sequences