Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 178031

Identification

Species:
Physcomitrella patens
Gene model
178031
Description
estExt_gwp_gw1.C_280061
Family
Sigma70-like
3D structure (top 5)
1RP3 1SIG 1L0O 2A6H 1L9Z
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Cyanidioschyzon merolae

CMR165C Score: 1

Expression data

Expressed Sequence Tags

Ppa.1
Physcomitrella patens Sig2 mRNA for PpSIG2, complete cds /cds=p(236,1975) /gb=AB046872
Ppa.18172
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_160930) mRNA, complete cds /cds=p(243,2018) /gb=XM_001757423
Ppa.24245
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_178031) mRNA, complete cds /cds=p(1,1752) /gb=XM_001757532

Domain Architecture

Sigma70_r1_2 PF00140 178031
DomainStartEndBit scoreE-value
Sigma70_r1_226830450.55.9e-12
Sigma70_r234741794.43.5e-25
Sigma70_r3421503116.48.4e-32
Sigma70_r451556878.91.7e-20

Sequences