Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 180368

Identification

Species:
Selaginella moellendorffii
Gene model
180368
Description
estExt_Genewise1Plus.C_590092
Family
PHD
3D structure (top 5)
3BIY 1F81 1L3E 1TOT 2FC7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

879962 Score: 1

Arabidopsis thaliana

AT1G79000.1 Score: 1

Carica papaya

evm.TU.supercontig_10.15 Score: 1

Chlamydomonas reinhardtii

145462 Score: 1

Coccomyxa sp. C-169

82619 Score: 1

Micromonas pusilla CCMP1545

60218 Score: 1

Micromonas sp. RCC299

62442 Score: 1

Ostreococcus lucimarinus

24443 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g04490.1 Score: 1

Ostreococcus tauri

16654 Score: 1

Physcomitrella patens

52 Score: 1

Populus trichocarpa

803030 Score: 1

Sorghum bicolor

144151 Score: 1

Vitis vinifera

GSVIVP00029724001 Score: 1

Zea mays

GRMZM2G139977_P01 Score: 1

Expression data

Expressed Sequence Tags

At.21902
Arabidopsis thaliana HAC12 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 12); H3/H4 histone acetyltransferase/ transcription cofactor (HAC12) mRNA, complete cds /cds=p(250,5370) /gb=NM_101532
At.21972
Arabidopsis thaliana HAC1 (P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2 GENE); H3/H4 histone acetyltransferase/ transcription cofactor (HAC1) mRNA, complete cds /cds=p(411,5504) /gb=NM_106550
At.26162
Arabidopsis thaliana ATHPCAT2/HAC4 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 4); histone acetyltransferase (ATHPCAT2/HAC4) mRNA, complete cds /cds=p(1,4371) /gb=NM_104475
At.39511
Arabidopsis thaliana ATHPCAT4/HAC5 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 5); H3/H4 histone acetyltransferase/ histone acetyltransferase (ATHPCAT4/HAC5) mRNA, complete cds /cds=p(1,5013) /gb=NM_112135
Os.59276
Oryza sativa (japonica cultivar-group) Os02g0137500 (Os02g0137500) mRNA, complete cds /cds=p(1,5007) /gb=NM_001052365
Ppa.20399
Physcomitrella patens subsp. patens p300/CBP acetyltransferase-related protein (HAC1501) mRNA, partial cds /cds=p(1,4851) /gb=XM_001775523
Ppa.25097
Physcomitrella patens subsp. patens p300/CBP acetyltransferase-related protein (HAC1502) mRNA, partial cds /cds=p(1,3246) /gb=XM_001785305
Vvi.16090
VV_PEb24e08.b1 Vitis vinifera cv. perlette LibB Vitis vinifera cDNA, mRNA sequence /gb=EV236131

Domain Architecture

zf-TAZ PF02135 180368
DomainStartEndBit scoreE-value
zf-TAZ2810874.15e-19
PHD32938128.52e-05
DUF906389651570.12.5e-168
zf-TAZ89897730.56.8e-06

Sequences