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Gene model: 182189
Identification
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Genome Databases
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Arabidopsis lyrata
337754 Score: 1Arabidopsis thaliana
AT1G08880.1 Score: 1AT1G54690.1 Score: 1
Physcomitrella patens
182189 Score: 159714 Score: 1
8691 Score: 1
Physcomitrella patens
138283 Score: 1162789 Score: 1
182189 Score: 1
59714 Score: 1
Chlorella sp. NC64A
21904 Score: 154972 Score: 1
54989 Score: 1
27894 Score: 0.931
28450 Score: 0.931
Carica papaya
evm.TU.supercontig_9.140 Score: 1Physcomitrella patens
182189 Score: 159714 Score: 1
Physcomitrella patens
182189 Score: 18691 Score: 1
Ostreococcus lucimarinus
8995 Score: 19152 Score: 1
Physcomitrella patens
182189 Score: 159714 Score: 1
Oryza sativa subsp. japonica
LOC_Os12g34510.1 Score: 1Populus trichocarpa
729700 Score: 1827348 Score: 1
Physcomitrella patens
182189 Score: 18691 Score: 1
Sorghum bicolor
4779775 Score: 14845627 Score: 1
Physcomitrella patens
182189 Score: 159714 Score: 1
Vitis vinifera
GSVIVP00006109001 Score: 1Physcomitrella patens
182189 Score: 159714 Score: 1
8691 Score: 1
Zea mays
GRMZM2G046055_P01 Score: 1GRMZM2G096439_P01 Score: 1
GRMZM2G099066_P02 Score: 1
GRMZM2G107540_P01 Score: 0.925
Expression data
- NCBI EST Profile Viewer (UniGene: At.10837)
- NCBI EST Profile Viewer (UniGene: At.71450)
- NCBI EST Profile Viewer (UniGene: Cre.17527)
- NCBI EST Profile Viewer (UniGene: Hv.23038)
- NCBI EST Profile Viewer (UniGene: Mtr.1354)
- NCBI EST Profile Viewer (UniGene: Mtr.7576)
- NCBI EST Profile Viewer (UniGene: Pba.383)
- NCBI EST Profile Viewer (UniGene: Ppa.21828)
- NCBI EST Profile Viewer (UniGene: Ppa.302)
- NCBI EST Profile Viewer (UniGene: Ppa.7722)
- NCBI EST Profile Viewer (UniGene: Pth.358)
- NCBI EST Profile Viewer (UniGene: Pth.383)
- NCBI EST Profile Viewer (UniGene: Pth.5023)
- NCBI EST Profile Viewer (UniGene: Ptp.6653)
- NCBI EST Profile Viewer (UniGene: Ptp.6807)
- NCBI EST Profile Viewer (UniGene: Vca.6443)
- NCBI EST Profile Viewer (UniGene: Vvi.15876)
- NCBI EST Profile Viewer (UniGene: Vvi.2066)
- NCBI EST Profile Viewer (UniGene: Vvi.7584)
- NCBI EST Profile Viewer (UniGene: Vvi.9328)
Expressed Sequence Tags
- At.10837
- Arabidopsis thaliana At1g54690/T22H22_12 mRNA, complete cds /cds=p(82,510) /gb=AF411788
- At.71450
- Arabidopsis thaliana G-H2AX/GAMMA-H2AX/H2AXA/HTA5; DNA binding (G-H2AX/GAMMA-H2AX/H2AXA/HTA5) mRNA, complete cds /cds=p(125,553) /gb=NM_100760
- Cre.17527
- 1031009E04.x1 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas reinhardtii cDNA, mRNA sequence /gb=BI716304
- Hv.23038
- HVSMEk0002J15f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0002J15f, mRNA sequence /clone=HVSMEk0002J15f /gb=BG414469
- Mtr.1354
- MEUB595TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=GE347326
- Mtr.7576
- MEUAV15TR JCVI-MT2 Medicago truncatula cDNA 3', mRNA sequence /clone_end=3' /gb=GE350929
- Pba.383
- WS01124.BR_N24 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01124_N24 5', mRNA sequence /clone=WS01124_N24 /clone_end=5' /gb=DT496898
- Ppa.21828
- Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_162789) mRNA, complete cds /cds=p(1,399) /gb=XM_001761139
- Ppa.302
- Physcomitrella patens subsp. patens histone H2A (HTA1511) mRNA, complete cds /cds=p(198,620) /gb=XM_001762424
- Ppa.7722
- Physcomitrella patens subsp. patens histone H2A (HTA1505) mRNA, complete cds /cds=p(90,512) /gb=XM_001785164
- Pth.358
- WS0111.B21_L14 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_L14 3', mRNA sequence /clone=WS0111_L14 /clone_end=3' /gb=CV246234
- Pth.383
- Populus trichocarpa clone WS0124_P12 unknown mRNA /cds=p(63,491) /gb=EF147777
- Pth.5023
- WS01116.B21_N15 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01116_N15 3', mRNA sequence /clone=WS01116_N15 /clone_end=3' /gb=CV247051
- Ptp.6653
- N067F03 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA clone N067F03 5', mRNA sequence /clone=N067F03 /clone_end=5' /gb=CK110521
- Ptp.6807
- T082C12.5pR Populus shoot meristem cDNA library Populus tremula x Populus tremuloides cDNA clone T082C12 5', mRNA sequence /clone=T082C12 /clone_end=5' /gb=DN499732
- Vca.6443
- CBGZ4818.fwd CBGZ Volvox carteri f. nagariensis induced male 69-1b, 8kb neb notI Volvox carteri f. nagariensis cDNA clone CBGZ4818 5', mRNA sequence /clone=CBGZ4818 /clone_end=5' /gb=FD835518
- Vvi.15876
- SBB03149 Inflorescence (VvS11) Vitis vinifera cDNA clone SBB03149, mRNA sequence /clone=SBB03149 /gb=EE103393
- Vvi.2066
- WIN1122.C21_K13 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1122_K13 3', mRNA sequence /clone=WIN1122_K13 /clone_end=3' /gb=EC984691
- Vvi.7584
- WIN0213.TB24_F07 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN0213_F07 3', mRNA sequence /clone=WIN0213_F07 /clone_end=3' /gb=EC926739
- Vvi.9328
- WIN0415.C21_C05 Cab Sauv pericarp normalized (WIN04) Vitis vinifera cDNA clone WIN0415_C05 3', mRNA sequence /clone=WIN0415_C05 /clone_end=3' /gb=EC932028
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