Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 186244

Identification

Species:
Chlamydomonas reinhardtii
Gene model
186244
Description
estExt_fgenesh2_pg.C_80104
Family
ARID
3D structure (top 5)
2JXJ 1IG6 1C20 2EQY 2JRZ
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

484793 Score: 1

Arabidopsis thaliana

AT3G43240.1 Score: 1

Carica papaya

evm.TU.supercontig_82.49 Score: 1

Coccomyxa sp. C-169

82285 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g26390.1 Score: 1

Physcomitrella patens

741 Score: 1

Populus trichocarpa

260021 Score: 1

Sorghum bicolor

4748052 Score: 1

Selaginella moellendorffii

431374 Score: 1

Vitis vinifera

GSVIVP00034008001 Score: 1

Zea mays

GRMZM2G140156_P01 Score: 1
GRMZM2G093668_P01 Score: 0.945

Expression data

Expressed Sequence Tags

At.36303
Arabidopsis thaliana ARID/BRIGHT DNA-binding domain-containing protein (AT3G43240) mRNA, complete cds /cds=p(303,2546) /gb=NM_114192
Cre.16177
Chlamydomonas reinhardtii DNA binding protein (CHLREDRAFT_186244) mRNA, complete cds /cds=p(147,2336) /gb=XM_001702638
Mtr.11956
EST608595 GLSD Medicago truncatula cDNA clone pGLSD-30L12, mRNA sequence /clone=pGLSD-30L12 /gb=BQ123019
Mtr.9271
EST334404 DSIL Medicago truncatula cDNA clone pDSIL-1M15, mRNA sequence /clone=pDSIL-1M15 /gb=AW775339
Os.77817
Oryza sativa Japonica Group cDNA clone:J013050J22, full insert sequence /gb=AK066110
Vvi.20422
WIN0516.C21_N06 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0516_N06 3', mRNA sequence /clone=WIN0516_N06 /clone_end=3' /gb=EC937867

Domain Architecture

ARID PF01388 186244
DomainStartEndBit scoreE-value
ARID548668-0.40.00019

Sequences