Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 186648

Identification

Species:
Chlamydomonas reinhardtii
Gene model
186648
Description
estExt_fgenesh2_pg.C_70372
Family
PBF-2-like
3D structure (top 5)
1L3A
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

894964 Score: 1

Arabidopsis thaliana

AT1G71260.1 Score: 1

Carica papaya

evm.TU.supercontig_249.7 Score: 1

Coccomyxa sp. C-169

77430 Score: 1

Micromonas pusilla CCMP1545

30105 Score: 1

Micromonas sp. RCC299

62160 Score: 1

Ostreococcus lucimarinus

8400 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g05350.1 Score: 1

Ostreococcus tauri

37364 Score: 1

Populus trichocarpa

414440 Score: 1

Sorghum bicolor

4769655 Score: 1

Selaginella moellendorffii

84708 Score: 1

Vitis vinifera

GSVIVP00031986001 Score: 1

Zea mays

GRMZM2G117529_P01 Score: 1
GRMZM2G155662_P01 Score: 1

Expression data

Expressed Sequence Tags

Cre.13809
Chlamydomonas reinhardtii EZY18 mRNA for transcription regulator Pbf-2, complete cds /cds=p(131,847) /gb=AB267745
Cre.15223
Chlamydomonas reinhardtii transcription factor (CHLREDRAFT_186648) mRNA, complete cds /cds=p(133,849) /gb=XM_001701733

Domain Architecture

Whirly PF08536 186648
DomainStartEndBit scoreE-value
Whirly8022426.81e-07

Sequences