Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 187248

Identification

Species:
Chlamydomonas reinhardtii
Gene model
187248
Description
estExt_fgenesh2_pg.C_30419
Family
RB
3D structure (top 5)
2R7G 2QDJ
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478590 Score: 1

Arabidopsis thaliana

AT3G12280.1 Score: 1

Carica papaya

evm.TU.supercontig_169.34 Score: 1

Coccomyxa sp. C-169

70385 Score: 1

Ostreococcus lucimarinus

27862 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g42600.2 Score: 1
LOC_Os08g42600.1 Score: 0.998

Ostreococcus tauri

24582 Score: 1

Physcomitrella patens

10529 Score: 1

Populus trichocarpa

639804 Score: 1

Sorghum bicolor

4764709 Score: 1

Selaginella moellendorffii

442657 Score: 1

Vitis vinifera

GSVIVP00032361001 Score: 1

Zea mays

GRMZM2G153150_P02 Score: 1
GRMZM2G155528_P02 Score: 1
GRMZM2G155528_P03 Score: 1
GRMZM2G153150_P01 Score: 0.989
GRMZM2G153150_P03 Score: 0.989
GRMZM2G155528_P01 Score: 0.989
GRMZM2G155528_P04 Score: 0.989

Expression data

Expressed Sequence Tags

Cre.16941
Chlamydomonas reinhardtii retinoblastoma protein (MAT3) mRNA, complete cds /cds=p(54,3683) /gb=XM_001696577
Vca.2742
CBGZ18183.fwd CBGZ Volvox carteri f. nagariensis induced male 69-1b, 8kb neb notI Volvox carteri f. nagariensis cDNA clone CBGZ18183 5', mRNA sequence /clone=CBGZ18183 /clone_end=5' /gb=FD815062
Vca.6614
CBGZ5665.fwd CBGZ Volvox carteri f. nagariensis induced male 69-1b, 8kb neb notI Volvox carteri f. nagariensis cDNA clone CBGZ5665 5', mRNA sequence /clone=CBGZ5665 /clone_end=5' /gb=FD837103

Domain Architecture

RB_A PF01858 187248
DomainStartEndBit scoreE-value
RB_A4236261107.8e-30
RB_B8139451321.9e-36

Sequences