Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 188711

Identification

Species:
Chlamydomonas reinhardtii
Gene model
188711
Description
estExt_fgenesh2_pg.C_110254
Family
Jumonji
3D structure (top 5)
3D8C 1VRB 2YU1 2W2I 2OX0
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

487465 Score: 1

Arabidopsis thaliana

AT5G06550.1 Score: 1

Chlorella sp. NC64A

137703 Score: 1

Carica papaya

evm.TU.supercontig_222.12 Score: 1

Coccomyxa sp. C-169

17039 Score: 1

Ostreococcus lucimarinus

12370 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g36450.1 Score: 1

Ostreococcus tauri

16032 Score: 1

Physcomitrella patens

139383 Score: 1

Sorghum bicolor

5056683 Score: 1

Selaginella moellendorffii

78122 Score: 1

Vitis vinifera

GSVIVP00027131001 Score: 1

Zea mays

GRMZM2G078198_P01 Score: 1
GRMZM2G078198_P02 Score: 1

Expression data

Expressed Sequence Tags

Cre.15440
Chlamydomonas reinhardtii JmjC protein (CHLREDRAFT_188711) mRNA, complete cds /cds=p(30,1544) /gb=XM_001690838
Hv.7036
HDP33M01w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP33M01, mRNA sequence /clone=HDP33M01 /gb=EX586682
Vca.547
CBGX761.fwd CBGX Volvox carteri f. nagariensis induced male 69-1b, 8kb Volvox carteri f. nagariensis cDNA clone CBGX761 5', mRNA sequence /clone=CBGX761 /clone_end=5' /gb=FD801975

Domain Architecture

JmjC PF02373 188711
DomainStartEndBit scoreE-value
JmjC29540635.81.8e-07

Sequences