Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 190458

Identification

Species:
Chlamydomonas reinhardtii
Gene model
190458
Description
estExt_fgenesh2_pg.C_190061
Family
Sigma70-like
3D structure (top 5)
1L0O 1L9Z 2A6H 1RP3 1SIG
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Cre.13706
Chlamydomonas reinhardtii SIG1 mRNA for chloroplast RNA polymerase sigma factor, partial cds /cds=p(1,753) /gb=AB049220
Cre.8923
Chlamydomonas reinhardtii chloroplast RNA polymerase sigma factor, c (RPOD) mRNA, complete cds /cds=p(133,2391) /gb=XM_001693223

Domain Architecture

Sigma70_r2 PF04542 190458
DomainStartEndBit scoreE-value
Sigma70_r249456469.21.5e-17
Sigma70_r356865146.69.9e-11
Sigma70_r466271599.21.5e-26

Sequences