Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 195088

Identification

Species:
Populus trichocarpa
Gene model
195088
Description
gw1.IV.177.1
Family
zf-HD
3D structure (top 5)
1WH5 1WH7 2DA4
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_140.53 Score: 1

Vitis vinifera

GSVIVP00020963001 Score: 1

Expression data

Expressed Sequence Tags

At.19633
Arabidopsis thaliana ATHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34); DNA binding / transcription factor (ATHB34) mRNA, complete cds /cds=p(298,1236) /gb=NM_113813
At.27604
Arabidopsis thaliana ATHB30/ZFHD3 (ZINC FINGER HOMEODOMAIN 3); DNA binding / transcription factor (ATHB30/ZFHD3) mRNA, complete cds /cds=p(319,1134) /gb=NM_121525
At.50017
Arabidopsis thaliana ATHB29/ZFHD1 (ZINC FINGER HOMEODOMAIN 1); DNA binding / transcription activator/ transcription factor (ATHB29/ZFHD1) mRNA, complete cds /cds=p(1,729) /gb=NM_105628
At.9361
Arabidopsis thaliana ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23); DNA binding / transcription factor (ATHB23) mRNA, complete cds /cds=p(128,1132) /gb=NM_123338
Vvi.17484
S1G04262 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G04262, mRNA sequence /clone=S1G04262 /gb=EE076216
Vvi.6894
WIN0510.C21_B19 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0510_B19 3', mRNA sequence /clone=WIN0510_B19 /clone_end=3' /gb=EC935686

Domain Architecture

ZF-HD_dimer PF04770 195088
DomainStartEndBit scoreE-value
ZF-HD_dimer3899149.77.9e-42

Sequences