Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 197090

Identification

Species:
Populus trichocarpa
Gene model
197090
Description
gw1.IV.2179.1
Family
Jumonji

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_27.138 Score: 1

Expression data

Expressed Sequence Tags

At.32630
Arabidopsis thaliana B160; transcription factor (B160) mRNA, complete cds /cds=p(1,2784) /gb=NM_118263
At.42102
Arabidopsis thaliana transcription factor (AT1G11950) mRNA, complete cds /cds=p(1,2628) /gb=NM_101067
Os.79778
Oryza sativa (japonica cultivar-group) Os02g0109400 (Os02g0109400) mRNA, complete cds /cds=p(1,2994) /gb=NM_001052179
Ppa.19248
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_118936) mRNA, partial cds /cds=p(1,1998) /gb=XM_001757080
Vvi.11982
CAP0006_IVR_F05 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0006_IVR_F05 3', mRNA sequence /clone=CAP0006_IVR_F05 /clone_end=3' /gb=CF519154
Vvi.2997
CA12EI302IF_E11 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI302IF_E11 5', mRNA sequence /clone=CA12EI302IF_E11 /clone_end=5' /gb=CA816066

Domain Architecture

JmjC PF02373 197090
DomainStartEndBit scoreE-value
JmjC58872222.76.7e-06

Sequences