Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 199501

Identification

Species:
Populus trichocarpa
Gene model
199501
Description
gw1.IV.4590.1
Family
SET
3D structure (top 5)
2H21 1N3J
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

486098 Score: 1

Arabidopsis thaliana

AT3G56570.1 Score: 1

Chlorella sp. NC64A

134525 Score: 1

Chlamydomonas reinhardtii

169142 Score: 1

Coccomyxa sp. C-169

16061 Score: 1

Micromonas pusilla CCMP1545

39853 Score: 1

Ostreococcus lucimarinus

16466 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g65730.1 Score: 1

Sorghum bicolor

4976530 Score: 1

Selaginella moellendorffii

107696 Score: 1

Vitis vinifera

GSVIVP00003639001 Score: 1

Zea mays

GRMZM2G092759_P04 Score: 1

Expression data

Expressed Sequence Tags

At.53954
Arabidopsis thaliana SET domain-containing protein (AT3G56570) mRNA, complete cds /cds=p(1,1596) /gb=NM_115515
Hv.12289
HX09E17r HX Hordeum vulgare subsp. vulgare cDNA clone HX09E17 5-PRIME, mRNA sequence /clone=HX09E17 /clone_end=5' /gb=CA031201
Os.59514
Oryza sativa Japonica Group cDNA, clone: J100026F15, full insert sequence /cds=p(15,1502) /gb=AK243108

Domain Architecture

SET PF00856 199501
DomainStartEndBit scoreE-value
SET1528053.66.8e-13

Sequences