Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 202798

Identification

Species:
Physcomitrella patens
Gene model
202798
Description
estExt_Genewise1.C_120028
Family
HSF
3D structure (top 5)
3HTS 1HKS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

914975 Score: 1

Arabidopsis thaliana

AT1G77570.1 Score: 1

Chlorella sp. NC64A

15492 Score: 1

Physcomitrella patens

202798 Score: 1
39037 Score: 1

Carica papaya

evm.TU.supercontig_49.32 Score: 1

Micromonas pusilla CCMP1545

9563 Score: 1

Micromonas sp. RCC299

55695 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g35790.3 Score: 1

Ostreococcus tauri

22651 Score: 1

Physcomitrella patens

202798 Score: 1
39037 Score: 1

Sorghum bicolor

4791960 Score: 1

Zea mays

GRMZM2G025685_P01 Score: 1

Expression data

Expressed Sequence Tags

Pba.10851
WS01226.BR_I21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01226_I21 5', mRNA sequence /clone=WS01226_I21 /clone_end=5' /gb=DT472578
Pth.367
Populus trichocarpa clone WS0125_K14 unknown mRNA /cds=p(145,1251) /gb=EF147879

Domain Architecture

HSF_DNA-bind PF00447 202798
DomainStartEndBit scoreE-value
HSF_DNA-bind23116541.2e-14

Sequences