Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 206268

Identification

Species:
Populus trichocarpa
Gene model
206268
Description
gw1.V.1669.1
Family
C3H

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

472211 Score: 1

Arabidopsis thaliana

AT1G19860.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g56750.1 Score: 1

Physcomitrella patens

159636 Score: 1

Sorghum bicolor

4985657 Score: 1

Vitis vinifera

GSVIVP00036805001 Score: 1

Zea mays

GRMZM2G046968_P01 Score: 1

Expression data

Expressed Sequence Tags

Pba.8395
WS02526.BR_F18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02526_F18 5', mRNA sequence /clone=WS02526_F18 /clone_end=5' /gb=DT479595
Pth.8395
WS02526.BR_F18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02526_F18 5', mRNA sequence /clone=WS02526_F18 /clone_end=5' /gb=DT479595
Ptp.9864
B004P10.5pR Hybrid aspen plasmid library Populus tremula x Populus tremuloides cDNA clone B004P10 5', mRNA sequence /clone=B004P10 /clone_end=5' /gb=CK099990
Vvi.6465
WIN107.C21_B07 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA clone WIN107_B07 3', mRNA sequence /clone=WIN107_B07 /clone_end=3' /gb=EC978210

Domain Architecture

zf-CCCH PF00642 206268
DomainStartEndBit scoreE-value
zf-CCCH349375160.011

Sequences