Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 216087

Identification

Species:
Physcomitrella patens
Gene model
216087
Description
estExt_Genewise1.C_1230106
Family
SET
3D structure (top 5)
2R3A 2RFI 1ML9 3H6L 2W5Y
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Chlorella sp. NC64A

142939 Score: 1

Ostreococcus lucimarinus

32372 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g08210.1 Score: 1

Expression data

Expressed Sequence Tags

At.21894
Arabidopsis thaliana unknown protein (AT4G15180) mRNA, complete cds /cds=p(439,7446) /gb=NM_117606
Os.18478
Oryza sativa Japonica Group cDNA clone:J023150L05, full insert sequence /gb=AK121489
Ppa.20013
Physcomitrella patens subsp. patens predicted protein (SDG1515) mRNA, complete cds /cds=p(1,8559) /gb=XM_001770195
Ppa.5128
Physcomitrella patens subsp. patens predicted protein (SDG1516) mRNA, complete cds /cds=p(1,7986) /gb=XM_001781697

Domain Architecture

SET PF00856 216087
DomainStartEndBit scoreE-value
SET214472.91.1e-18

Sequences