Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 217093

Identification

Species:
Populus trichocarpa
Gene model
217093
Description
gw1.VII.1398.1
Family
BSD
3D structure (top 5)
1PFJ 2DII 1Y5O
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

892577 Score: 1

Arabidopsis thaliana

AT1G55750.1 Score: 1

Populus trichocarpa

206999 Score: 1
217093 Score: 1

Carica papaya

evm.TU.supercontig_181.6 Score: 1

Chlamydomonas reinhardtii

420943 Score: 1

Coccomyxa sp. C-169

76590 Score: 1

Micromonas pusilla CCMP1545

51857 Score: 1

Micromonas sp. RCC299

60505 Score: 1

Ostreococcus lucimarinus

18495 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g25060.1 Score: 1

Populus trichocarpa

206999 Score: 1
217093 Score: 1

Ostreococcus tauri

37417 Score: 1

Physcomitrella patens

152192 Score: 1

Vitis vinifera

GSVIVP00033473001 Score: 1

Expression data

Expressed Sequence Tags

At.42907
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL06-88-F16 /cds=p(52,1827) /gb=AK226523
At.50300
Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL25-11-L24 /cds=p(1293,2027) /gb=AK176589
Hv.8926
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf175b18, mRNA sequence /gb=AK248433
Os.11028
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA224G03, full insert sequence /gb=CT829475
Vvi.12898
VV_PEd03d08.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241933

Domain Architecture

BSD PF03909 217093
DomainStartEndBit scoreE-value
BSD10817331.82.5e-06
BSD18525043.48.2e-10

Sequences