Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 218690

Identification

Species:
Populus trichocarpa
Gene model
218690
Description
gw1.VII.2995.1
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

490909 Score: 1

Arabidopsis thaliana

AT4G36990.1 Score: 1

Carica papaya

evm.TU.supercontig_55.149 Score: 1

Vitis vinifera

GSVIVP00019488001 Score: 1

Zea mays

GRMZM2G002131_P01 Score: 1
GRMZM2G143073_P01 Score: 1

Expression data

Expressed Sequence Tags

At.49954
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX814533
At.5365
Arabidopsis thaliana HSF4 (HEAT SHOCK FACTOR 4); DNA binding / transcription factor (HSF4) mRNA, complete cds /cds=p(484,1338) /gb=NM_119862
Mtr.10591
EST1225248 MTY Medicago truncatula cDNA clone MTYAF37, mRNA sequence /clone=MTYAF37 /gb=DW016287
Mtr.13459
Medicago truncatula clone MTYFH_FI_FJ_FK1G-P-2 unknown mRNA /cds=m(83,829) /gb=BT052747
Mtr.8663
Medicago truncatula clone MTYFL_FM_FN_FO1G-M-13 unknown mRNA /cds=p(142,1221) /gb=BT053195

Domain Architecture

HSF_DNA-bind PF00447 218690
DomainStartEndBit scoreE-value
HSF_DNA-bind7202198.51.6e-56

Sequences