Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 21909

Identification

Species:
Coccomyxa sp. C-169
Gene model
21909
Description
gw1.21.174.1
Family
GNAT
3D structure (top 5)
1N71 2R7H 2OB0 2CNT 1QST
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

321517 Score: 1

Arabidopsis thaliana

AT2G38130.1 Score: 1
AT2G38130.2 Score: 1

Cyanidioschyzon merolae

CMS482C Score: 1

Chlorella sp. NC64A

14420 Score: 1

Carica papaya

evm.TU.supercontig_70.66 Score: 1

Chlamydomonas reinhardtii

117568 Score: 1

Micromonas pusilla CCMP1545

7626 Score: 1

Micromonas sp. RCC299

76569 Score: 1

Ostreococcus lucimarinus

8262 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g32280.1 Score: 1

Ostreococcus tauri

21287 Score: 1

Physcomitrella patens

119104 Score: 1

Populus trichocarpa

727122 Score: 1

Sorghum bicolor

4818137 Score: 1

Selaginella moellendorffii

122523 Score: 1

Vitis vinifera

GSVIVP00037957001 Score: 1

Zea mays

GRMZM2G061150_P01 Score: 1
GRMZM2G175891_P01 Score: 1

Expression data

Expressed Sequence Tags

At.12456
Arabidopsis thaliana ATMAK3 (Arabidopsis thaliana MAK3 homologue); N-acetyltransferase (ATMAK3) mRNA, complete cds /cds=p(236,808) /gb=NM_129369
Hv.7651
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf19m07, mRNA sequence /gb=AK249200
Vvi.9649
CAP0007_IIR_E06 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0007_IIR_E06 3', mRNA sequence /clone=CAP0007_IIR_E06 /clone_end=3' /gb=CF518545

Domain Architecture

Acetyltransf_1 PF00583 21909
DomainStartEndBit scoreE-value
Acetyltransf_13211265.61.9e-16

Sequences

protein sequence
transcript sequence