Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 247688

Identification

Species:
Populus trichocarpa
Gene model
247688
Description
gw1.XIX.88.1
Family
DDT

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

908843 Score: 1

Arabidopsis thaliana

AT5G08630.1 Score: 1

Cyanidioschyzon merolae

CMJ244C Score: 1

Carica papaya

evm.TU.supercontig_37.81 Score: 1

Coccomyxa sp. C-169

75732 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g35100.1 Score: 1
LOC_Os02g35100.2 Score: 1

Physcomitrella patens

177158 Score: 1

Sorghum bicolor

144459 Score: 1

Selaginella moellendorffii

100168 Score: 1

Vitis vinifera

GSVIVP00019226001 Score: 1

Zea mays

GRMZM2G064145_P07 Score: 1

Expression data

Expressed Sequence Tags

At.32548
Arabidopsis thaliana DDT domain-containing protein (AT5G08630) mRNA, complete cds /cds=p(207,2378) /gb=NM_120950
Hv.19372
HVSMEa0008K14f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0008K14f, mRNA sequence /clone=HVSMEa0008K14f /gb=BF622773
Os.24275
Oryza sativa Japonica Group cDNA clone:J013106B07, full insert sequence /cds=p(186,2039) /gb=AK067393
Os.74371
Oryza sativa Japonica Group cDNA, clone: J080307K04, full insert sequence /gb=AK242494
Vvi.22719
WIN084.C21_C21 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN084_C21 3', mRNA sequence /clone=WIN084_C21 /clone_end=3' /gb=EC960625

Domain Architecture

DDT PF02791 247688
DomainStartEndBit scoreE-value
DDT27233331.92.3e-06

Sequences