Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 253984

Identification

Species:
Populus trichocarpa
Gene model
253984
Description
gw1.XV.3420.1
Family
C2H2

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

492266 Score: 1

Arabidopsis thaliana

AT4G25610.1 Score: 1

Carica papaya

evm.TU.supercontig_107.72 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g39660.1 Score: 1
LOC_Os09g39660.2 Score: 1

Vitis vinifera

GSVIVP00037676001 Score: 1

Zea mays

GRMZM2G142502_P02 Score: 1
GRMZM2G161324_P02 Score: 1
GRMZM2G142502_P01 Score: 0.992
GRMZM2G161324_P01 Score: 0.992

Expression data

Expressed Sequence Tags

Pba.1626
WS02512.B21_F13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02512_F13 3', mRNA sequence /clone=WS02512_F13 /clone_end=3' /gb=CV241485
Pba.6406
WS02543.B21_H13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_H13 3', mRNA sequence /clone=WS02543_H13 /clone_end=3' /gb=DT489891
Pba.9536
WS02526.B21_G04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02526_G04 3', mRNA sequence /clone=WS02526_G04 /clone_end=3' /gb=DT484775
Pth.1626
WS02543.B21_H13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_H13 3', mRNA sequence /clone=WS02543_H13 /clone_end=3' /gb=DT489891
Pth.9536
WS0259.B21_G13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0259_G13 3', mRNA sequence /clone=WS0259_G13 /clone_end=3' /gb=CV245796

Domain Architecture

zf-C2H2 PF00096 253984
DomainStartEndBit scoreE-value
zf-C2H2577920.80.0052

Sequences