Plant Transcription factor database - Universität Potsdam

version: 3.0

Gene model: 26271

Identification

Species: Micromonas pusilla CCMP1545 Gene model 26271 Description estExt_Genewise1.C_40334 Family TIG 3D structure (top 5) 3ERR 1ZGK 2ZWA 1R6B 2VPJ
	PDB entry:

Genome Databases

JGI/DOE

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

Ortholog identification by INPARANOID

Expression data

Expressed Sequence Tags

Cre.7840: Chlamydomonas reinhardtii strain CC-503 cw92 mt+ /cds=p(1,13503) /gb=XM_001695681
Vca.3749: CBGZ18312.fwd CBGZ Volvox carteri f. nagariensis induced male 69-1b, 8kb neb notI Volvox carteri f. nagariensis cDNA clone CBGZ18312 5', mRNA sequence /clone=CBGZ18312 /clone_end=5' /gb=FD815292

Domain Architecture

26271

Domain	Start	End	Bit score	E-value
Kelch_1	25	70	35.8	1.7e-07
Kelch_2	25	70	36.5	1.1e-07
Kelch_1	78	124	17	0.031
Kelch_2	78	123	18.1	0.037
TIG	290	377	29.3	1.5e-05
Filamin	380	489	49.3	1.5e-11
Kelch_1	750	800	21.2	0.0043
DHC_N2	1091	1504	506.3	4e-149
AAA_5	2335	2479	8.1	0.0002
Dynein_heavy	3702	4436	733.2	2e-217

Sequences

protein sequence
transcript sequence