Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 272178

Identification

Species:
Selaginella moellendorffii
Gene model
272178
Description
estExt_fgenesh1_kg.C_1140002
Family
MYB-related

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

904197 Score: 1

Arabidopsis thaliana

AT2G47210.1 Score: 1

Cyanidioschyzon merolae

CMN257C Score: 1

Carica papaya

evm.TU.supercontig_18.96 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g46330.1 Score: 1

Physcomitrella patens

119332 Score: 1

Populus trichocarpa

807470 Score: 1

Sorghum bicolor

144268 Score: 1

Vitis vinifera

GSVIVP00028159001 Score: 1

Expression data

Expressed Sequence Tags

At.27099
Arabidopsis thaliana myb family transcription factor (AT2G47210) mRNA, complete cds /cds=p(171,1496) /gb=NM_180139
Os.11178
Oryza sativa Japonica Group cDNA clone:J023079C11, full insert sequence /gb=AK071090
Ppa.22845
Physcomitrella patens subsp. patens DNA methyltransferase 1-associated protein (SWRCA1501) mRNA, complete cds /cds=p(1,1332) /gb=XM_001757568
Ppa.3767
CAYZ4525.rev CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens subsp. patens cDNA clone CAYZ4525 3', mRNA sequence /clone=CAYZ4525 /clone_end=3' /gb=FC420160
Sbi.12822
PIC1_38_C11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM324983

Domain Architecture

Myb_DNA-binding PF00249 272178
DomainStartEndBit scoreE-value
Myb_DNA-binding12316933.21.1e-06

Sequences