Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 274032

Identification

Species:
Populus trichocarpa
Gene model
274032
Description
gw1.163.66.1
Family
C2H2
3D structure (top 5)
1UBD 2I13 2JP9 2CSH 2DLQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481690 Score: 1
908222 Score: 1

Populus trichocarpa

274032 Score: 1
650539 Score: 1

Populus trichocarpa

274032 Score: 1
650539 Score: 1

Arabidopsis thaliana

AT2G28200.1 Score: 1
AT5G03510.1 Score: 1

Sorghum bicolor

5005098 Score: 1

Expression data

Expressed Sequence Tags

Pba.10191
WS01917.C21_P03 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01917_P03 3', mRNA sequence /clone=WS01917_P03 /clone_end=3' /gb=DT469489
Pba.2295
WS01228.B21_G16 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01228_G16 3', mRNA sequence /clone=WS01228_G16 /clone_end=3' /gb=DT476127
Pth.10191
WS01917.C21_P03 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01917_P03 3', mRNA sequence /clone=WS01917_P03 /clone_end=3' /gb=DT469489
Pth.2295
Populus trichocarpa clone WS01228_G16 unknown mRNA /cds=p(135,1067) /gb=EF147153
Vvi.12262
WIN1028.C21_E15 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA clone WIN1028_E15 3', mRNA sequence /clone=WIN1028_E15 /clone_end=3' /gb=EC975476

Domain Architecture

zf-C2H2 PF00096 274032
DomainStartEndBit scoreE-value
zf-C2H29411618.90.019

Sequences