Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 28526

Identification

Species:
Coccomyxa sp. C-169
Gene model
28526
Description
e_gw1.6.298.1
Family
SET
3D structure (top 5)
2R3A 1H3I 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483538 Score: 1
486462 Score: 1

Arabidopsis thaliana

AT1G76710.1 Score: 1
AT1G76710.2 Score: 1

Chlorella sp. NC64A

18588 Score: 1

Carica papaya

evm.TU.supercontig_49.86 Score: 1

Micromonas pusilla CCMP1545

23211 Score: 1

Ostreococcus lucimarinus

5434 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g13740.2 Score: 1
LOC_Os09g13740.1 Score: 0.997

Ostreococcus tauri

22195 Score: 1

Physcomitrella patens

33525 Score: 1

Populus trichocarpa

801345 Score: 1

Sorghum bicolor

5057200 Score: 1

Selaginella moellendorffii

3415 Score: 1

Vitis vinifera

GSVIVP00031726001 Score: 1

Zea mays

GRMZM2G072440_P04 Score: 1
GRMZM2G147619_P04 Score: 1
GRMZM2G072440_P02 Score: 0.949
GRMZM2G147619_P01 Score: 0.949
GRMZM2G072440_P03 Score: 0.939
GRMZM2G147619_P02 Score: 0.939

Expression data

Expressed Sequence Tags

Cre.17804
Chlamydomonas reinhardtii histone methyltransferase (CHLREDRAFT_191388) mRNA, complete cds /cds=p(1,3318) /gb=XM_001694691
Ppa.11052
Physcomitrella patens subsp. patens predicted protein (SDG1517) mRNA, complete cds /cds=p(1,5943) /gb=XM_001774848

Domain Architecture

SET PF00856 28526
DomainStartEndBit scoreE-value
SET76205160.45.4e-45

Sequences