Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 30594

Identification

Species:
Physcomitrella patens
Gene model
30594
Description
gw1.469.4.1
Family
SET
3D structure (top 5)
2R3A 1ML9 3F9X 2RFI 1MVH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

488222 Score: 1

Arabidopsis thaliana

AT5G13960.1 Score: 1

Chlorella sp. NC64A

142107 Score: 1

Coccomyxa sp. C-169

59484 Score: 1

Micromonas pusilla CCMP1545

62078 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g70220.1 Score: 1

Populus trichocarpa

409038 Score: 1

Sorghum bicolor

4881238 Score: 1

Selaginella moellendorffii

79965 Score: 1

Vitis vinifera

GSVIVP00006194001 Score: 1

Zea mays

GRMZM2G031407_P01 Score: 1

Expression data

Expressed Sequence Tags

At.8330
Arabidopsis thaliana At5g13960 mRNA sequence /gb=AY080822
Os.31816
Oryza sativa Japonica Group cDNA clone:002-114-E02, full insert sequence /gb=AK106700
Ppa.21390
Physcomitrella patens subsp. patens histone methyltransferase Su3-9 group (SDG1519) mRNA, complete cds /cds=p(1,1638) /gb=XM_001775288

Domain Architecture

YDG_SRA PF02182 30594
DomainStartEndBit scoreE-value
YDG_SRA62228185.11.8e-52
Pre-SET257359130.16.6e-36
SET361521114.92.5e-31

Sequences