Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 321853

Identification

Species:
Arabidopsis lyrata
Gene model
321853
Description
fgenesh1_pm.C_scaffold_4001910
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G41690.1 Score: 1

Carica papaya

evm.TU.supercontig_224.11 Score: 1

Populus trichocarpa

576364 Score: 1

Expression data

Expressed Sequence Tags

At.53095
Arabidopsis thaliana AT-HSFB3 (Arabidopsis thaliana heat shock transcription factor B3); DNA binding / transcription factor (AT-HSFB3) mRNA, complete cds /cds=p(1,735) /gb=NM_129732
Mtr.11180
EST669152 MTUS Medicago truncatula cDNA clone MTUS-7H4, mRNA sequence /clone=MTUS-7H4 /gb=CF068431

Domain Architecture

HSF_DNA-bind PF00447 321853
DomainStartEndBit scoreE-value
HSF_DNA-bind41227144.33.9e-40

Sequences