Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 322281

Identification

Species:
Arabidopsis lyrata
Gene model
322281
Description
fgenesh1_pm.C_scaffold_4002338
Family
bZIP

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G46270.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g49420.1 Score: 1

Populus trichocarpa

411188 Score: 1

Sorghum bicolor

4879455 Score: 1

Zea mays

GRMZM2G011932_P01 Score: 1
GRMZM2G011932_P03 Score: 1
GRMZM2G145425_P01 Score: 1
GRMZM2G145425_P03 Score: 1

Expression data

Expressed Sequence Tags

At.19966
Arabidopsis thaliana GBF3 (G-BOX BINDING FACTOR 3); transcription factor (GBF3) mRNA, complete cds /cds=p(283,1431) /gb=NM_130190
Mtr.14251
EST647221 HOGA Medicago truncatula cDNA clone HOGA-31M5, mRNA sequence /clone=HOGA-31M5 /gb=CB894429
Mtr.18614
EST509031 HOGA Medicago truncatula cDNA clone pHOGA-16H2 5' end, mRNA sequence /clone=pHOGA-16H2 /clone_end=5' /gb=BG647412

Domain Architecture

MFMR PF07777 322281
DomainStartEndBit scoreE-value
MFMR1181330.92.5e-96
bZIP_225530939.51.3e-08
bZIP_125531893.76.4e-25

Sequences