Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 324038

Identification

Species:
Arabidopsis lyrata
Gene model
324038
Description
fgenesh1_pm.C_scaffold_5001582
Family
SET
3D structure (top 5)
2H21
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G55080.1 Score: 1

Carica papaya

evm.TU.supercontig_1.287 Score: 1

Selaginella moellendorffii

102436 Score: 1

Vitis vinifera

GSVIVP00029499001 Score: 1

Expression data

Expressed Sequence Tags

At.50280
Arabidopsis thaliana SET domain-containing protein (AT3G55080) mRNA, complete cds /cds=p(68,1459) /gb=NM_115366
Vvi.22375
WIN0521.C21_B01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0521_B01 3', mRNA sequence /clone=WIN0521_B01 /clone_end=3' /gb=EC940892

Domain Architecture

SET PF00856 324038
DomainStartEndBit scoreE-value
SET4527470.18.3e-18

Sequences