Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 325029

Identification

Species:
Arabidopsis lyrata
Gene model
325029
Description
fgenesh1_pm.C_scaffold_6000249
Family
HB
3D structure (top 5)
1NK2 2E1O 2CUE 1JGG 2DMQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G03790.1 Score: 1

Carica papaya

evm.TU.supercontig_5.102 Score: 1

Vitis vinifera

GSVIVP00021713001 Score: 1

Expression data

Expressed Sequence Tags

At.54712
49-L021586-065-006-B11S-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 006-B11, mRNA sequence /clone=006-B11 /gb=DR750590
Pba.6500
WS02542.B21_L24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02542_L24 3', mRNA sequence /clone=WS02542_L24 /clone_end=3' /gb=DT489628
Pth.6500
WS02542.B21_L24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02542_L24 3', mRNA sequence /clone=WS02542_L24 /clone_end=3' /gb=DT489628

Domain Architecture

Homeobox PF00046 325029
DomainStartEndBit scoreE-value
Homeobox7913377.64.4e-20

Sequences