Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 325766

Identification

Species:
Arabidopsis lyrata
Gene model
325766
Description
fgenesh1_pm.C_scaffold_6000986
Family
C3H
3D structure (top 5)
2E5G 1WF0 3D2W 2CPF 2JVO
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G12440.1 Score: 1

Carica papaya

evm.TU.supercontig_84.23 Score: 1

Populus trichocarpa

751997 Score: 1

Expression data

Expressed Sequence Tags

At.32141
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT5G12440) mRNA, complete cds /cds=p(488,2146) /gb=NM_121282
Pth.12941
F101P95.5pR Populus flower cDNA library Populus trichocarpa cDNA clone F101P95 5', mRNA sequence /clone=F101P95 /clone_end=5' /gb=CK101595
Vvi.13513
CAB10006_IIIa_Fa_F02 Cabernet Sauvignon Flower Pre-bloom - CAB1 Vitis vinifera cDNA clone CAB10006_IIIa_Fa_F02 5', mRNA sequence /clone=CAB10006_IIIa_Fa_F02 /clone_end=5' /gb=CB971846

Domain Architecture

zf-CCCH PF00642 325766
DomainStartEndBit scoreE-value
zf-CCCH22725223.60.0008

Sequences