Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 337099

Identification

Species:
Arabidopsis lyrata
Gene model
337099
Description
fgenesh1_pg.C_scaffold_1003664
Family
C3H
3D structure (top 5)
1WKB 1FFY 1WZ2 1GAX 1ILE
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.14755
Arabidopsis thaliana meiotic asynaptic mutant 1 (ASY1) mRNA, complete cds /cds=p(125,1915) /gb=AF157556
At.22231
Arabidopsis thaliana isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase, putative (AT4G10320) mRNA, complete cds /cds=p(88,3660) /gb=NM_117100
Cre.3906
Chlamydomonas reinhardtii strain CC-503 cw92 mt+ /cds=p(1,3534) /gb=XM_001698181
Os.8879
Oryza sativa Japonica Group cDNA clone:J033041F01, full insert sequence /gb=AK101482
Os.92131
Oryza sativa Japonica Group cDNA clone:002-179-E12, full insert sequence /gb=AK111232
Ppa.6121
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_220535) mRNA, complete cds /cds=p(87,3614) /gb=XM_001775783

Domain Architecture

HORMA PF02301 337099
DomainStartEndBit scoreE-value
HORMA4523597.25.6e-26
zf-CCCH42945425.20.00026
tRNA-synt_16071011-2623.6e-08

Sequences