Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 342636

Identification

Species:
Arabidopsis lyrata
Gene model
342636
Description
fgenesh1_pg.C_scaffold_3002399
Family
ABI3VP1
3D structure (top 5)
1WID
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G24650.1 Score: 1

Carica papaya

evm.TU.supercontig_8.179 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g68370.3 Score: 1
LOC_Os01g68370.2 Score: 0.994
LOC_Os01g68370.4 Score: 0.992
LOC_Os01g68370.1 Score: 0.984

Physcomitrella patens

168363 Score: 1

Populus trichocarpa

408900 Score: 1

Sorghum bicolor

4799718 Score: 1

Vitis vinifera

GSVIVP00001240001 Score: 1

Zea mays

GRMZM2G133398_P02 Score: 1
GRMZM2G133398_P01 Score: 0.992

Expression data

Expressed Sequence Tags

At.19959
Arabidopsis thaliana mRNA for abscisic acid-insensitive protein 3, complete cds, clone: RAFL22-43-H23 /cds=p(542,2704) /gb=AK220879
Mtr.14611
EST635396 GLSD Medicago truncatula cDNA clone pGLSD-27I19, mRNA sequence /clone=pGLSD-27I19 /gb=CA858141
Vvi.7567
CAB40006_IIIa_Fa_B07 Cabernet Sauvignon Berry - CAB4 Vitis vinifera cDNA clone CAB40006_IIIa_Fa_B07 5', mRNA sequence /clone=CAB40006_IIIa_Fa_B07 /clone_end=5' /gb=CB978525

Domain Architecture

B3 PF02362 342636
DomainStartEndBit scoreE-value
B357567892.91.1e-24

Sequences