Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 347147

Identification

Species:
Arabidopsis lyrata
Gene model
347147
Description
fgenesh1_pg.C_scaffold_5000539
Family
C3H
3D structure (top 5)
1I84 1CII 2B5U 1C1G 2R05
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G27700.1 Score: 1
AT3G27700.2 Score: 1

Carica papaya

evm.TU.supercontig_108.53 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g32340.1 Score: 1

Physcomitrella patens

102008 Score: 1

Populus trichocarpa

258695 Score: 1

Sorghum bicolor

5057103 Score: 1

Selaginella moellendorffii

437689 Score: 1

Expression data

Expressed Sequence Tags

At.8026
Arabidopsis thaliana RNA recognition motif (RRM)-containing protein (AT3G27700) mRNA, complete cds /cds=p(399,3125) /gb=NM_180677

Domain Architecture

zf-CCCH PF00642 347147
DomainStartEndBit scoreE-value
zf-CCCH20122716.70.0093
RRM_144050441.14.5e-09

Sequences