Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 356702

Identification

Species:
Arabidopsis lyrata
Gene model
356702
Description
fgenesh1_pg.C_scaffold_8000489
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G43840.1 Score: 1

Ostreococcus lucimarinus

8561 Score: 1

Selaginella moellendorffii

107503 Score: 1

Expression data

Expressed Sequence Tags

At.55345
Arabidopsis thaliana AT-HSFA6A (Arabidopsis thaliana heat shock transcription factor A6A); DNA binding / transcription factor (AT-HSFA6A) mRNA, complete cds /cds=p(1,849) /gb=NM_123751
Ppa.16751
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_206139) mRNA, partial cds /cds=p(377,1177) /gb=XM_001758240
Vvi.24263
VVB181A04_414523 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB181A04 5, mRNA sequence /clone=VVB181A04 /clone_end=5' /gb=CD721308

Domain Architecture

HSF_DNA-bind PF00447 356702
DomainStartEndBit scoreE-value
HSF_DNA-bind17180190.25.9e-54

Sequences