Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 358254

Identification

Species:
Arabidopsis lyrata
Gene model
358254
Description
fgenesh1_pg.C_scaffold_8002041
Family
MADS
3D structure (top 5)
1K6O 1MNM 1N6J 1EGW 1HBX
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G60440.1 Score: 1

Carica papaya

evm.TU.supercontig_106.16 Score: 1

Arabidopsis lyrata

358254 Score: 1
868378 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g74440.1 Score: 1
LOC_Os09g02830.1 Score: 1

Populus trichocarpa

557553 Score: 1

Sorghum bicolor

4152679 Score: 1

Vitis vinifera

GSVIVP00038603001 Score: 1

Zea mays

GRMZM2G163335_P01 Score: 1

Expression data

Expressed Sequence Tags

At.29160
Arabidopsis thaliana MADS-box protein AGL62 (AGL62) mRNA, complete cds /cds=p(36,935) /gb=EU493093
At.52900
58-L022243-065-008-B08-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 008-B08, mRNA sequence /clone=008-B08 /gb=DR750384

Domain Architecture

SRF-TF PF00319 358254
DomainStartEndBit scoreE-value
SRF-TF1464761.4e-19

Sequences