Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 38595

Identification

Species:
Physcomitrella patens
Gene model
38595
Description
gw1.355.55.1
Family
Orphans
3D structure (top 5)
3HDG 1SRR 3BRE 1NY5 2R25
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

863051 Score: 1

Arabidopsis thaliana

AT5G26594.1 Score: 1

Chlorella sp. NC64A

138871 Score: 1

Carica papaya

evm.TU.supercontig_8.194 Score: 1

Physcomitrella patens

38593 Score: 1
38595 Score: 1
54095 Score: 0.917

Coccomyxa sp. C-169

24645 Score: 1

Micromonas pusilla CCMP1545

9052 Score: 1

Micromonas sp. RCC299

77031 Score: 1

Ostreococcus lucimarinus

9190 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g53100.1 Score: 1

Populus trichocarpa

408913 Score: 1
804242 Score: 1

Sorghum bicolor

4964289 Score: 1

Selaginella moellendorffii

115529 Score: 1

Vitis vinifera

GSVIVP00026752001 Score: 1

Physcomitrella patens

38595 Score: 1
54095 Score: 1

Zea mays

GRMZM2G007526_P01 Score: 1

Expression data

Expressed Sequence Tags

Ppa.4972
CAYY6295.rev CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY6295 3', mRNA sequence /clone=CAYY6295 /clone_end=3' /gb=FC369201

Domain Architecture

Response_reg PF00072 38595
DomainStartEndBit scoreE-value
Response_reg1113103.56.4e-28

Sequences