Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 38618

Identification

Species:
Coccomyxa sp. C-169
Gene model
38618
Description
estExt_Genewise1.C_130158
Family
HMG
3D structure (top 5)
2GCL 3F5R
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

905150 Score: 1

Arabidopsis thaliana

AT3G28730.1 Score: 1

Carica papaya

evm.TU.supercontig_211.5 Score: 1

Chlamydomonas reinhardtii

189879 Score: 1

Micromonas pusilla CCMP1545

22975 Score: 1

Micromonas sp. RCC299

63692 Score: 1

Ostreococcus lucimarinus

1364 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g08970.1 Score: 1

Ostreococcus tauri

36484 Score: 1

Physcomitrella patens

21655 Score: 1

Populus trichocarpa

577589 Score: 1

Sorghum bicolor

4877521 Score: 1

Selaginella moellendorffii

166865 Score: 1

Vitis vinifera

GSVIVP00020888001 Score: 1

Zea mays

GRMZM2G032252_P01 Score: 1
GRMZM2G053521_P01 Score: 1
GRMZM2G032252_P02 Score: 0.992
GRMZM2G053521_P02 Score: 0.992

Domain Architecture

SSrecog PF03531 38618
DomainStartEndBit scoreE-value
SSrecog221443349.85.2e-102
Rtt106364508107.35e-29
HMG_box564632111.23.5e-30

Sequences