Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 410828

Identification

Species:
Selaginella moellendorffii
Gene model
410828
Description
fgenesh2_pg.C_scaffold_13000326
Family
MYB-related
3D structure (top 5)
2YQK 1XC5 2CRG 2IW5 2CU7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

902822 Score: 1

Arabidopsis thaliana

AT2G36960.1 Score: 1
AT2G36960.2 Score: 1

Carica papaya

evm.TU.supercontig_56.18 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g13790.1 Score: 1
LOC_Os03g13790.2 Score: 1
LOC_Os03g56234.1 Score: 1
LOC_Os03g56234.2 Score: 1

Populus trichocarpa

256979 Score: 1

Sorghum bicolor

4872533 Score: 1

Zea mays

GRMZM2G152319_P01 Score: 1
GRMZM2G152319_P02 Score: 0.915

Expression data

Expressed Sequence Tags

At.27079
Arabidopsis thaliana TKI1 (TSL-KINASE INTERACTING PROTEIN 1); DNA binding / transcription factor (TKI1) mRNA, complete cds /cds=p(202,2433) /gb=NM_179942
Hv.21792
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf144c03, mRNA sequence /gb=AK252132
Mtr.8571
METB093TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY477249
Os.14693
Oryza sativa Japonica Group cDNA clone:J033117C04, full insert sequence /gb=AK103029

Domain Architecture

Myb_DNA-binding PF00249 410828
DomainStartEndBit scoreE-value
Myb_DNA-binding327737.94e-08

Sequences